CDS

Accession Number TCMCG017C04692
gbkey CDS
Protein Id OMP08695.1
Location 11775..13442
GeneID InterPro:IPR003590
Organism Corchorus olitorius
locus_tag COLO4_06202

Protein

Length 555aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012648.1
Definition Leucine-rich repeat, ribonuclease inhibitor subtype [Corchorus olitorius]
Locus_tag COLO4_06202

EGGNOG-MAPPER Annotation

COG_category ATY
Description RAN GTPase-activating protein
KEGG_TC -
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14319        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009524        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCCACAGCAAATTCTCAACGCAGGCCATTTTCAATTAAGCTATGGCCTCCTAGTGAAAGCACTCGGCAGGTTCTTGTGCAACGATTGACAAACAATCTGACCAGTAACTCTATCTTTACCCAGAAGTATGGTGCTCTTAACAAAGAAGATGCTGAGGAGAATGCTAAGAAAATTGAGGATGTAGCTTTTAACACAGCAAATGAACAGTATGATAGGGAACCTGATGGTGATGGAGGTGCTGCAGTGCAGCTTTATGCCAAGGAATGCAGTAAACTTTTGCTGGAAGTTCTTAAAAGAGGGCCTACCCCCAAGGAGGAGGAGGAGAAGGAGGAGAAGGAGAAGAAGGAGAAGAAGGAGGAGAAGGAAGAGAAGAAGGAGTTGGTGTCTGAGAAAGATATCTCCTGTGAAACACTCTTTGATATATCTAAGGGCCTGCGTTCTTTTATTGAGGCAGAGGAGGCTGAGAGTCTTCTAAGGCCGTTAAAGGAACCTGGAAATAGTTACACCAAGATATGCTTTAGTAATAGAAGCTTTGGTATAGGAGCAGCCCGTGTTGCTGAGCCCATTTTGGCTTCCCTCAAGAATCAGTTGAAAGAAGTTGACTTGTCTGACTTTATTGCTGGAAGACCGGAGGATGAAGCCCTTGATGTTATGAACTTATTCTCAGCTGCCTTGGAGGGTAGTGTTTTGAGGTATCTTAACCTCTCAGATAATGCCTTAGGTGAGAAGGGTGTTAGGGCTTTTGGTGCTCTTTTGAAATCACAGAATTGCCTGGAGGAGCTCTATTTAATTAATGATGGTATCTCGGAGGAAGCTGCCAGAGCTGTTTCTGAATTGATTCCCTCTACAGATAAGTTGAGGGTCCTTCACTTTCACAATAATATGACAGGAGATGAAGGTGCAATTGCAATTTCTGAGGTTGTGAAGCGGTCTCCTTTATTGGAGGATTTCCGATGCTCCTCTACCAGGGTTGGTTCAGAAGGAGGAGTTGCCTTATCAGAAGCACTTGAGTCTTGCATCCATTTAAAGAAACTTGATTTGCGGGACAATATGTTTGGTGTAGAAGCTGGAGTTCCACTGAGTAATGCTCTTTCAAAGTTTGTGGATCTGGTTGAGGTTTACTTGAGTTATCTCAACCTGGAAGATGAAGGTGCAATTGCTATAGCCAATGCTCTTAAGGAATCAGCTCCTTCTCTTCAAGTTTTGGATATGGCTGGAAATGACATAACAGCTGATGCTGCTCCTAGTATAGCTGCTTGTATAGCAGCAAAGCAGCAACTAACCAAGTTGAACTTGGCTGAGAATGAACTCAAGGATGAAGGTACGGTTCAAGTAAGTAAGGCTTTGGAAGAAGGACATGAGCATTTAAAGGAAGTTGATATGAGCACCAATTTTATAAGAAGAGCTGGGGCTCGACATTTGGCTCAGGTAGTTATTCAGAAACCTGAGTTTACATTGTTGAACATCAATGGGAATATCATCTCTGATGATGGTATCGACGAGGTGAAGGAAATATTCAAGAAGTGTCCTGAGAAGCTTGGTTCCTTGGATGAGAATGATCCAGAAGGAGCAGATGATGATGAAGAATCTGGTGAAGGTGAAGATAATGATGATGAATTGGAATCTAAAATGAAGAATCTTGAAGTTAGTGAAGAAGAATAG
Protein:  
MDSTANSQRRPFSIKLWPPSESTRQVLVQRLTNNLTSNSIFTQKYGALNKEDAEENAKKIEDVAFNTANEQYDREPDGDGGAAVQLYAKECSKLLLEVLKRGPTPKEEEEKEEKEKKEKKEEKEEKKELVSEKDISCETLFDISKGLRSFIEAEEAESLLRPLKEPGNSYTKICFSNRSFGIGAARVAEPILASLKNQLKEVDLSDFIAGRPEDEALDVMNLFSAALEGSVLRYLNLSDNALGEKGVRAFGALLKSQNCLEELYLINDGISEEAARAVSELIPSTDKLRVLHFHNNMTGDEGAIAISEVVKRSPLLEDFRCSSTRVGSEGGVALSEALESCIHLKKLDLRDNMFGVEAGVPLSNALSKFVDLVEVYLSYLNLEDEGAIAIANALKESAPSLQVLDMAGNDITADAAPSIAACIAAKQQLTKLNLAENELKDEGTVQVSKALEEGHEHLKEVDMSTNFIRRAGARHLAQVVIQKPEFTLLNINGNIISDDGIDEVKEIFKKCPEKLGSLDENDPEGADDDEESGEGEDNDDELESKMKNLEVSEEE